Twenty-one genome sequences from Pseudomonas species and 19 genome sequences from diverse bacteria isolated from the rhizosphere and endosphere of Populus deltoides.
Identifieur interne : 002863 ( Main/Exploration ); précédent : 002862; suivant : 002864Twenty-one genome sequences from Pseudomonas species and 19 genome sequences from diverse bacteria isolated from the rhizosphere and endosphere of Populus deltoides.
Auteurs : Steven D. Brown [États-Unis] ; Sagar M. Utturkar ; Dawn M. Klingeman ; Courtney M. Johnson ; Stanton L. Martin ; Miriam L. Land ; Tse-Yuan S. Lu ; Christopher W. Schadt ; Mitchel J. Doktycz ; Dale A. PelletierSource :
- Journal of bacteriology [ 1098-5530 ] ; 2012.
Descripteurs français
- KwdFr :
- ADN bactérien (composition chimique), ADN bactérien (génétique), Analyse de séquence d'ADN (MeSH), Bactéries (génétique), Bactéries (isolement et purification), Données de séquences moléculaires (MeSH), Endophytes (génétique), Endophytes (isolement et purification), Génome bactérien (MeSH), Microbiologie du sol (MeSH), Métagénome (MeSH), Populus (microbiologie), Racines de plante (microbiologie), Rhizosphère (MeSH).
- MESH :
- composition chimique : ADN bactérien.
- génétique : ADN bactérien, Bactéries, Endophytes.
- isolement et purification : Bactéries, Endophytes.
- microbiologie : Populus, Racines de plante.
- Analyse de séquence d'ADN, Données de séquences moléculaires, Génome bactérien, Microbiologie du sol, Métagénome, Rhizosphère.
English descriptors
- KwdEn :
- Bacteria (genetics), Bacteria (isolation & purification), DNA, Bacterial (chemistry), DNA, Bacterial (genetics), Endophytes (genetics), Endophytes (isolation & purification), Genome, Bacterial (MeSH), Metagenome (MeSH), Molecular Sequence Data (MeSH), Plant Roots (microbiology), Populus (microbiology), Rhizosphere (MeSH), Sequence Analysis, DNA (MeSH), Soil Microbiology (MeSH).
- MESH :
- chemical , chemistry : DNA, Bacterial.
- genetics : Bacteria, DNA, Bacterial, Endophytes.
- isolation & purification : Bacteria, Endophytes.
- microbiology : Plant Roots, Populus.
- Genome, Bacterial, Metagenome, Molecular Sequence Data, Rhizosphere, Sequence Analysis, DNA, Soil Microbiology.
Abstract
To aid in the investigation of the Populus deltoides microbiome, we generated draft genome sequences for 21 Pseudomonas strains and 19 other diverse bacteria isolated from Populus deltoides roots. Genome sequences for isolates similar to Acidovorax, Bradyrhizobium, Brevibacillus, Caulobacter, Chryseobacterium, Flavobacterium, Herbaspirillum, Novosphingobium, Pantoea, Phyllobacterium, Polaromonas, Rhizobium, Sphingobium, and Variovorax were generated.
DOI: 10.1128/JB.01243-12
PubMed: 23045501
PubMed Central: PMC3486089
Affiliations:
Links toward previous steps (curation, corpus...)
Le document en format XML
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Johnson</name></author><author><name sortKey="Martin, Stanton L" sort="Martin, Stanton L" uniqKey="Martin S" first="Stanton L" last="Martin">Stanton L. Martin</name></author><author><name sortKey="Land, Miriam L" sort="Land, Miriam L" uniqKey="Land M" first="Miriam L" last="Land">Miriam L. Land</name></author><author><name sortKey="Lu, Tse Yuan S" sort="Lu, Tse Yuan S" uniqKey="Lu T" first="Tse-Yuan S" last="Lu">Tse-Yuan S. Lu</name></author><author><name sortKey="Schadt, Christopher W" sort="Schadt, Christopher W" uniqKey="Schadt C" first="Christopher W" last="Schadt">Christopher W. Schadt</name></author><author><name sortKey="Doktycz, Mitchel J" sort="Doktycz, Mitchel J" uniqKey="Doktycz M" first="Mitchel J" last="Doktycz">Mitchel J. Doktycz</name></author><author><name sortKey="Pelletier, Dale A" sort="Pelletier, Dale A" uniqKey="Pelletier D" first="Dale A" last="Pelletier">Dale A. Pelletier</name></author></analytic><series><title level="j">Journal of bacteriology</title><idno type="eISSN">1098-5530</idno><imprint><date when="2012" type="published">2012</date></imprint></series></biblStruct></sourceDesc></fileDesc><profileDesc><textClass><keywords scheme="KwdEn" xml:lang="en"><term>Bacteria (genetics)</term><term>Bacteria (isolation & purification)</term><term>DNA, Bacterial (chemistry)</term><term>DNA, Bacterial (genetics)</term><term>Endophytes (genetics)</term><term>Endophytes (isolation & purification)</term><term>Genome, Bacterial (MeSH)</term><term>Metagenome (MeSH)</term><term>Molecular Sequence Data (MeSH)</term><term>Plant Roots (microbiology)</term><term>Populus (microbiology)</term><term>Rhizosphere (MeSH)</term><term>Sequence Analysis, DNA (MeSH)</term><term>Soil Microbiology (MeSH)</term></keywords><keywords scheme="KwdFr" xml:lang="fr"><term>ADN bactérien (composition chimique)</term><term>ADN bactérien (génétique)</term><term>Analyse de séquence d'ADN (MeSH)</term><term>Bactéries (génétique)</term><term>Bactéries (isolement et purification)</term><term>Données de séquences moléculaires (MeSH)</term><term>Endophytes (génétique)</term><term>Endophytes (isolement et purification)</term><term>Génome bactérien (MeSH)</term><term>Microbiologie du sol (MeSH)</term><term>Métagénome (MeSH)</term><term>Populus (microbiologie)</term><term>Racines de plante (microbiologie)</term><term>Rhizosphère (MeSH)</term></keywords><keywords scheme="MESH" type="chemical" qualifier="chemistry" xml:lang="en"><term>DNA, Bacterial</term></keywords><keywords scheme="MESH" qualifier="composition chimique" xml:lang="fr"><term>ADN bactérien</term></keywords><keywords scheme="MESH" qualifier="genetics" xml:lang="en"><term>Bacteria</term><term>DNA, Bacterial</term><term>Endophytes</term></keywords><keywords scheme="MESH" qualifier="génétique" xml:lang="fr"><term>ADN bactérien</term><term>Bactéries</term><term>Endophytes</term></keywords><keywords scheme="MESH" qualifier="isolation & purification" xml:lang="en"><term>Bacteria</term><term>Endophytes</term></keywords><keywords scheme="MESH" qualifier="isolement et purification" xml:lang="fr"><term>Bactéries</term><term>Endophytes</term></keywords><keywords scheme="MESH" qualifier="microbiologie" xml:lang="fr"><term>Populus</term><term>Racines de plante</term></keywords><keywords scheme="MESH" qualifier="microbiology" xml:lang="en"><term>Plant Roots</term><term>Populus</term></keywords><keywords scheme="MESH" xml:lang="en"><term>Genome, Bacterial</term><term>Metagenome</term><term>Molecular Sequence Data</term><term>Rhizosphere</term><term>Sequence Analysis, DNA</term><term>Soil Microbiology</term></keywords><keywords scheme="MESH" xml:lang="fr"><term>Analyse de séquence d'ADN</term><term>Données de séquences moléculaires</term><term>Génome bactérien</term><term>Microbiologie du sol</term><term>Métagénome</term><term>Rhizosphère</term></keywords></textClass></profileDesc></teiHeader><front><div type="abstract" xml:lang="en">To aid in the investigation of the Populus deltoides microbiome, we generated draft genome sequences for 21 Pseudomonas strains and 19 other diverse bacteria isolated from Populus deltoides roots. Genome sequences for isolates similar to Acidovorax, Bradyrhizobium, Brevibacillus, Caulobacter, Chryseobacterium, Flavobacterium, Herbaspirillum, Novosphingobium, Pantoea, Phyllobacterium, Polaromonas, Rhizobium, Sphingobium, and Variovorax were generated.</div></front></TEI><pubmed><MedlineCitation Status="MEDLINE" Owner="NLM"><PMID Version="1">23045501</PMID><DateCompleted><Year>2013</Year><Month>01</Month><Day>04</Day></DateCompleted><DateRevised><Year>2018</Year><Month>11</Month><Day>13</Day></DateRevised><Article PubModel="Print"><Journal><ISSN IssnType="Electronic">1098-5530</ISSN><JournalIssue CitedMedium="Internet"><Volume>194</Volume><Issue>21</Issue><PubDate><Year>2012</Year><Month>Nov</Month></PubDate></JournalIssue><Title>Journal of bacteriology</Title><ISOAbbreviation>J Bacteriol</ISOAbbreviation></Journal><ArticleTitle>Twenty-one genome sequences from Pseudomonas species and 19 genome sequences from diverse bacteria isolated from the rhizosphere and endosphere of Populus deltoides.</ArticleTitle><Pagination><MedlinePgn>5991-3</MedlinePgn></Pagination><ELocationID EIdType="doi" ValidYN="Y">10.1128/JB.01243-12</ELocationID><Abstract><AbstractText>To aid in the investigation of the Populus deltoides microbiome, we generated draft genome sequences for 21 Pseudomonas strains and 19 other diverse bacteria isolated from Populus deltoides roots. Genome sequences for isolates similar to Acidovorax, Bradyrhizobium, Brevibacillus, Caulobacter, Chryseobacterium, Flavobacterium, Herbaspirillum, Novosphingobium, Pantoea, Phyllobacterium, Polaromonas, Rhizobium, Sphingobium, and Variovorax were generated.</AbstractText></Abstract><AuthorList CompleteYN="Y"><Author ValidYN="Y"><LastName>Brown</LastName><ForeName>Steven D</ForeName><Initials>SD</Initials><AffiliationInfo><Affiliation>Biosciences Division, Oak Ridge National Laboratory, Oak Ridge, Tennessee, USA. brownsd@ornl.gov</Affiliation></AffiliationInfo></Author><Author ValidYN="Y"><LastName>Utturkar</LastName><ForeName>Sagar M</ForeName><Initials>SM</Initials></Author><Author ValidYN="Y"><LastName>Klingeman</LastName><ForeName>Dawn M</ForeName><Initials>DM</Initials></Author><Author ValidYN="Y"><LastName>Johnson</LastName><ForeName>Courtney M</ForeName><Initials>CM</Initials></Author><Author ValidYN="Y"><LastName>Martin</LastName><ForeName>Stanton L</ForeName><Initials>SL</Initials></Author><Author ValidYN="Y"><LastName>Land</LastName><ForeName>Miriam L</ForeName><Initials>ML</Initials></Author><Author ValidYN="Y"><LastName>Lu</LastName><ForeName>Tse-Yuan S</ForeName><Initials>TY</Initials></Author><Author ValidYN="Y"><LastName>Schadt</LastName><ForeName>Christopher W</ForeName><Initials>CW</Initials></Author><Author ValidYN="Y"><LastName>Doktycz</LastName><ForeName>Mitchel J</ForeName><Initials>MJ</Initials></Author><Author ValidYN="Y"><LastName>Pelletier</LastName><ForeName>Dale A</ForeName><Initials>DA</Initials></Author></AuthorList><Language>eng</Language><PublicationTypeList><PublicationType UI="D016428">Journal Article</PublicationType><PublicationType UI="D013485">Research Support, Non-U.S. Gov't</PublicationType></PublicationTypeList></Article><MedlineJournalInfo><Country>United States</Country><MedlineTA>J 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Doktycz</name><name sortKey="Johnson, Courtney M" sort="Johnson, Courtney M" uniqKey="Johnson C" first="Courtney M" last="Johnson">Courtney M. Johnson</name><name sortKey="Klingeman, Dawn M" sort="Klingeman, Dawn M" uniqKey="Klingeman D" first="Dawn M" last="Klingeman">Dawn M. Klingeman</name><name sortKey="Land, Miriam L" sort="Land, Miriam L" uniqKey="Land M" first="Miriam L" last="Land">Miriam L. Land</name><name sortKey="Lu, Tse Yuan S" sort="Lu, Tse Yuan S" uniqKey="Lu T" first="Tse-Yuan S" last="Lu">Tse-Yuan S. Lu</name><name sortKey="Martin, Stanton L" sort="Martin, Stanton L" uniqKey="Martin S" first="Stanton L" last="Martin">Stanton L. Martin</name><name sortKey="Pelletier, Dale A" sort="Pelletier, Dale A" uniqKey="Pelletier D" first="Dale A" last="Pelletier">Dale A. Pelletier</name><name sortKey="Schadt, Christopher W" sort="Schadt, Christopher W" uniqKey="Schadt C" first="Christopher W" last="Schadt">Christopher W. Schadt</name><name sortKey="Utturkar, Sagar M" sort="Utturkar, Sagar M" uniqKey="Utturkar S" first="Sagar M" last="Utturkar">Sagar M. Utturkar</name></noCountry><country name="États-Unis"><region name="Tennessee"><name sortKey="Brown, Steven D" sort="Brown, Steven D" uniqKey="Brown S" first="Steven D" last="Brown">Steven D. Brown</name></region></country></tree></affiliations></record>Pour manipuler ce document sous Unix (Dilib)
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